NOISSUE - Update protobuf generated files and improve algorithm handling in runner service (#612)

* Update protobuf generated files and improve algorithm handling in runner service

- Bump protoc version from v7.35.0 to v7.35.1 in generated protobuf files.
- Refactor RunRequest message in runner.proto to use string paths for algorithm and requirements instead of byte arrays.
- Update runner service to handle algorithm and requirements paths, removing the need for temporary file creation.
- Enhance error handling for missing algorithm paths in the runner service.
- Modify tests to align with the new RunRequest structure and ensure proper file handling.

Signed-off-by: Sammy Oina <sammyoina@gmail.com>

* chore: update protoc version to 35.1 in CI workflow

Signed-off-by: Sammy Oina <sammyoina@gmail.com>

* feat: update systemd service configurations and dependencies for improved service management

Signed-off-by: Sammy Oina <sammyoina@gmail.com>

* fix: adjust AlgoWorkingDir handling in tests for Docker algorithm

Signed-off-by: Sammy Oina <sammyoina@gmail.com>

---------

Signed-off-by: Sammy Oina <sammyoina@gmail.com>

agent/algorithm/algorithm.go

@@ -18,11 +18,14 @@ const (
 	AlgoTypeKey                 = "algo_type"
 	AlgoArgsKey                 = "algo_args"
 
-	ResultsDir     = "results"
-	DatasetsDir    = "datasets"
-	AlgoWorkingDir = "/cocos"
+	ResultsDir  = "results"
+	DatasetsDir = "datasets"
 )
 
+// AlgoWorkingDir is the base directory used by algorithm runners (e.g. docker)
+// to create datasets/results mounts. It is a variable so tests can override it.
+var AlgoWorkingDir = "/cocos"
+
 func AlgorithmTypeToContext(ctx context.Context, algoType string) context.Context {
 	return metadata.AppendToOutgoingContext(ctx, AlgoTypeKey, algoType)
 }

agent/algorithm/docker/docker.go

@@ -90,6 +90,16 @@ func (d *docker) Run() error {
 		return fmt.Errorf("could not find image ID")
 	}
 
+	datasetsDir := path.Join(algorithm.AlgoWorkingDir, algorithm.DatasetsDir)
+	resultsDir := path.Join(algorithm.AlgoWorkingDir, algorithm.ResultsDir)
+
+	if err := os.MkdirAll(datasetsDir, 0o755); err != nil {
+		return fmt.Errorf("could not create datasets directory %s: %v", datasetsDir, err)
+	}
+	if err := os.MkdirAll(resultsDir, 0o755); err != nil {
+		return fmt.Errorf("could not create results directory %s: %v", resultsDir, err)
+	}
+
 	// Create and start the container.
 	respContainer, err := cli.ContainerCreate(ctx, &container.Config{
 		Image:        dockerImageName,